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Lediga jobb för Scilifelab - april 2021 Indeed.com Sverige

18. jean.hausser@scilifelab.se consultant (bioengineering / bioinformatics) The lab is located at Karolinska Institutet and SciLifeLab in Stockholm, Sweden. National Bioinformatics Infrastructure Sweden (NBIS) constitutes the SciLifeLab Bioinformatics platform. NBIS is a distributed infrastructure with staff at six sites My group is located at SciLifeLab Stockholm, a joint venture also including Karolinska Institutet, Stockholm University and Uppsala University. Current Projects.

Sci Life Lab är ett nationellt centrum för molekylära biovetenskaper The multi-modality hypothesis-free biomarker discovery will use state-of-the-art analytical platforms and bioinformatics in collaboration with SciLife Lab. SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines2019Ingår i: GigaScience, ISSN 2047-217X, E-ISSN Stockholm Univ, DBB, Sci Life Lab, S-11419 Stockholm, Sweden. The concept of workflows has gained favour in the bioinformatics community, but there is Much genomic analysis is done in collaboration with SciLife Laboratory, Uppsala. functional genomics, bioinformatics, small RNA biology or related topics. We perform research in molecular, quantitative and applied genetics, and bioinformatics, across a range of lives Visa mer. Department of Animal Breeding and We perform research in molecular, quantitative and applied genetics, and bioinformatics, across a range of livestock species and companion animals. We also ESCG is located at the SciLifeLab in Stockholm, Sweden. It was founded on May 2015 by the initiative of Prof.

Systems Biology vid Chalmers tekniska högskola i Göteborg som kommer att ingå i plattformen Bioinformatics; Metabolomics vid Sveriges SciLifeLab Autoimmunity and Serology profiling facility SARS-CoV-2 antibody test statistics The total number of tests run at SciLifeLab Autoimmunity and For bioinformatics support, please contact: https://nbis.se/support/ Associate Head of Department with responsibility for SciLifeLab. Arne Elofsson. Professor in Bioinformatics 08-16 10 19 arne.elofsson@dbb.su.se Apply to one of the open positions at SciLifeLab!

Postdoktor i evolutionär växtgenetik / genomik - Uppsala

Our in-house RAD-Seq pipeline for quality control of RAD-seq libraries. RAD-seq allows for deep yet sparsely sampled sequencing of many individuals in a highly multiplexed manner, where typical Runs with illumina total RNA-sequencing data.

SciLifeLab - Genomic Medicine Sweden

Professor in Bioinformatics 08-16 10 19 arne.elofsson@dbb.su.se Apply to one of the open positions at SciLifeLab! Currently open positions at: Karolinska Institutet, KTH Royal Institute of Technology, Stockholm University and SciLifeLab workshop · 1. Methods!

Pre-course material Schedule. Maps & Travel Info. Map over Gothenburg Map over Gothenburg University Travel Info. Helpful Things.
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SciLifeLab offer education in many different ways. Alongside with courses and seminars there are mentorship programs and drop-in opportunities for discussing your own projects. Please read more about The Swedish Bioinformatics Advisory Program and Bioinformatics drop-in. The conference will be held at Science for Life Laboratory, Stockholm, Sweden the 21st to 23rd of August 2014.The PRIB precedes the ICPR, which will be held at a different location in Stockholm in August.Check out the detailed program and our keynote and tutorial speakers through the menu above. The proceedings are now online via Lecture Notes in Computer Science, and some of the contribution Education that enables the science of the future Courses and workshops SciLifeLab offer educational courses and workshops for PhD students, postdocs, investigators and other employees within all Swedish universities.

Wallenberg Advanced Bioinformatics Infrastructure . Originally KAW infrastructure . 15 employees in Uppsala - Stockholm . 6 months support free of charge . 4 calls a year, reviewed by external expert panel . There MUST be recipient in the group .
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NBIS is also coordinating the Swedish ELIXIR node. ChIP-Seq is a bioinformatics best-practice analysis pipeline used for chromatin immunoprecipitation (ChIP-seq) data analysis. The pipeline uses Nextflow , a bioinformatics workflow tool. It pre-processes raw data from FastQ inputs, aligns the reads and performs peak calling and extensive quality-control on the results. It then produces a set of partially-phased primary contigs and fully-phased haplotigs which represent divergent haplotypes. The recommended coverage for genome assembly based on read type: CLR – 30-50X unique molecular coverage per haplotye.

External Resources. IGV (Integrative Genomics Viewer) Home Education that enables the science of the future Courses and workshops SciLifeLab offer educational courses and workshops for PhD students, postdocs, investigators and other employees within all Swedish universities. The courses and workshops cover knowledge and understanding about the advanced BMC Bioinformatics 14 Suppl 15 (-) S12 [2013-10-15; online 2013-10-15] Affiliated researcher PubMed DOI Crossref. Genome-wide probabilistic reconciliation analysis The IAPR international conference on Pattern Recognition in Bioinformatics (PRIB) aims to bring together top researchers, practitioners and students from around the world to present and discuss methods and applications of pattern recognition in the field of bioinformatics to solve problems in the life sciences. Bioinformatics Compute and Storage [Service] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Eukaryotic Single Cell Genomics (ESCG) We will build upon the infrastructures already existing within SciLifeLab for high-throughput sequencing (NGI/Clinical Genomics) and bioinformatics (NBIS). In the past 3 years, GAPS has brought together research groups from across Sweden who study the genetic basis of common diseases.
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The courses and workshops cover knowledge and understanding about the advanced BMC Bioinformatics 14 Suppl 15 (-) S12 [2013-10-15; online 2013-10-15] Affiliated researcher PubMed DOI Crossref. Genome-wide probabilistic reconciliation analysis The IAPR international conference on Pattern Recognition in Bioinformatics (PRIB) aims to bring together top researchers, practitioners and students from around the world to present and discuss methods and applications of pattern recognition in the field of bioinformatics to solve problems in the life sciences. Bioinformatics Compute and Storage [Service] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Eukaryotic Single Cell Genomics (ESCG) We will build upon the infrastructures already existing within SciLifeLab for high-throughput sequencing (NGI/Clinical Genomics) and bioinformatics (NBIS). In the past 3 years, GAPS has brought together research groups from across Sweden who study the genetic basis of common diseases. You can find code ranging from simple bioinformatics resources and general programming tools right through to complete data analysis pipelines.

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Aligns to the reference genome, gives QC metrics and finishes with gene count matrices. RNA-Seq is a bioinformatics analysis pipeline used for RNA sequencing data.

SciLifeLab workshop Externwebben - SLU

Bioinformatics 28 (12) i90-i96 [2012-06-15; online 2012-06-13] Affiliated researcher Year 2011. PubMed DOI Crossref. Improved predictions by Pcons.net using multiple SciLifeLab Bioinformatics (NBIS) and Genomics (NGI) were both top-ranked in the recent VR evaluation (September 2017). Workshops in advanced and applied bioinformatics NBIS –the Bioinformatics Platform Distributed research infrastructure with nodes at the 6 large university towns The Swedish node in ELIXIR, the European infrastructure for bioinformatics Staff: ~75 full-time equivalents Funding from: The SciLifeLab Bioinformatics platform (NBIS) organizes weekly drop-in sessions in Lund, Göteborg, Linköping, Stockholm, Uppsala, and Umeå. Bioinformatics experts are then available to discuss your bioinformatics needs, free of charge.

National Bioinformatics Infrastructure Sweden (NBIS) constitutes the SciLifeLab Bioinformatics platform.